lib/installation: Add new FlatpakUpdateFlag to prevent pruning the repo

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Add a new FLATPAK_UPDATE_FLAGS_NO_PRUNE so that we can specify from clients
when we don't want to perform a prune right after updating a flatpak, even
if no FLATPAK_UPDATE_FLAGS_NO_PULL flag has been set.

https://github.com/flatpak/flatpak/issues/1703

Closes: #1704
Approved by: alexlarsson

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