feat!: remove deprecated patch options (#10505)

* refactor: remove allowNonAppliedPatches

* refactor: remove ignorePatchFailures

* refactor: remove `strict` field in groupPatchedDependencies

* test: update test failure in package patching

* test: fix

* docs: update changesets

---------

Co-authored-by: Zoltan Kochan <z@kochan.io>

patching/apply-patch/src/index.ts

@@ -1,9 +1,7 @@
 import { PnpmError } from '@pnpm/error'
 import { applyPatch } from '@pnpm/patch-package/dist/applyPatches.js'
-import { globalWarn } from '@pnpm/logger'
 
 export interface ApplyPatchToDirOpts {
-  allowFailure?: boolean
   patchedDir: string
   patchFilePath: string
 }
@@ -27,12 +25,7 @@ export function applyPatchToDir (opts: ApplyPatchToDirOpts): boolean {
     process.chdir(cwd)
   }
   if (!success) {
-    const message = `Could not apply patch ${opts.patchFilePath} to ${opts.patchedDir}`
-    if (opts.allowFailure) {
-      globalWarn(message)
-    } else {
-      throw new PnpmError('PATCH_FAILED', message)
-    }
+    throw new PnpmError('PATCH_FAILED', `Could not apply patch ${opts.patchFilePath} to ${opts.patchedDir}`)
   }
   return success
 }