refactor: rename packages and consolidate runtime resolvers (#10999)

* refactor: rename workspace.sort-packages and workspace.pkgs-graph

- workspace.sort-packages -> workspace.projects-sorter
- workspace.pkgs-graph -> workspace.projects-graph

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* refactor: rename packages/ to core/ and pkg-manifest.read-package-json to reader

- Rename packages/ directory to core/ for clarity
- Rename pkg-manifest/read-package-json to pkg-manifest/reader (@pnpm/pkg-manifest.reader)
- Update all tsconfig, package.json, and lockfile references

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* refactor: consolidate runtime resolvers under engine/runtime domain

- Remove unused @pnpm/engine.runtime.node.fetcher package
- Rename engine/runtime/node.resolver to node-resolver (dash convention)
- Move resolving/bun-resolver to engine/runtime/bun-resolver
- Move resolving/deno-resolver to engine/runtime/deno-resolver
- Update all package names, tsconfig paths, and lockfile references

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* chore: update lockfile after removing node.fetcher

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: sort tsconfig references and package.json deps alphabetically

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: auto-fix import sorting

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: update __typings__ paths in tsconfig.lint.json for moved resolvers

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: remove deno-resolver from deps of bun-resolver

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>

patching/commands/src/patchCommit.ts

@@ -8,7 +8,7 @@ import { PnpmError } from '@pnpm/error'
 import { packlist } from '@pnpm/fs.packlist'
 import { install } from '@pnpm/installing.commands'
 import { globalWarn } from '@pnpm/logger'
-import { readPackageJsonFromDir } from '@pnpm/pkg-manifest.read-package-json'
+import { readPackageJsonFromDir } from '@pnpm/pkg-manifest.reader'
 import { parseWantedDependency, type ParseWantedDependencyResult } from '@pnpm/resolving.parse-wanted-dependency'
 import { getStorePath } from '@pnpm/store.path'
 import type { ProjectRootDir } from '@pnpm/types'