diff --git a/.changeset/eighty-squids-mate.md b/.changeset/eighty-squids-mate.md
new file mode 100644
index 0000000000..7191e4e6d9
--- /dev/null
+++ b/.changeset/eighty-squids-mate.md
@@ -0,0 +1,6 @@
+---
+"@pnpm/plugin-commands-installation": patch
+"pnpm": patch
+---
+
+Set `skipIfHasSideEffectsCache` to `true` when calling rebuild, fixing side effect caching issue when lockfile isn't shared [#6890](https://github.com/pnpm/pnpm/issues/6890).
diff --git a/pkg-manager/plugin-commands-installation/src/installDeps.ts b/pkg-manager/plugin-commands-installation/src/installDeps.ts
index d2dfe13315..ca417f4f23 100644
--- a/pkg-manager/plugin-commands-installation/src/installDeps.ts
+++ b/pkg-manager/plugin-commands-installation/src/installDeps.ts
@@ -327,6 +327,7 @@ when running add/update with the --workspace option')
         pending: true,
         storeController: store.ctrl,
         storeDir: store.dir,
+        skipIfHasSideEffectsCache: true,
       }
     )
   }
diff --git a/pkg-manager/plugin-commands-installation/src/recursive.ts b/pkg-manager/plugin-commands-installation/src/recursive.ts
index 95c35d3b73..8250ce03d9 100755
--- a/pkg-manager/plugin-commands-installation/src/recursive.ts
+++ b/pkg-manager/plugin-commands-installation/src/recursive.ts
@@ -413,6 +413,7 @@ export async function recursive (
     await rebuild.handler({
       ...opts,
       pending: opts.pending === true,
+      skipIfHasSideEffectsCache: true,
     }, [])
   }